PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0018s0046.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family B3
Protein Properties Length: 203aa    MW: 23350.7 Da    PI: 9.5551
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0018s0046.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.26.2e-131241962098
                          HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                   B3  20 kkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                          k+ +++h + ++e+ ++tlede+g++   k+     s r  l++GW+ F  +++L +gD +vF+l++ ++f  +v ++r
  Kaladp0018s0046.1.p 124 KPMVQSHAHMPKEDEMITLEDEDGNESPSKY--LADSTR--LSGGWRCFTLDHELVDGDALVFQLIRPTKF--KVYIIR 196
                          777888866677888****************..777655..*************************97777..888877 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019362.94E-18115198IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.104.0E-14117198IPR015300DNA-binding pseudobarrel domain
CDDcd100173.65E-17120196No hitNo description
SMARTSM010191.4E-11122198IPR003340B3 DNA binding domain
PfamPF023626.1E-11124196IPR003340B3 DNA binding domain
PROSITE profilePS508639.375140198IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    Send to blast
MVVSATSNYE KLRRQRLEEK KKRMEEVNLL NLSKSLSAAT PKSSPAKHRK PKSARKEVNL  60
SAVRRFRRMA GKSRPDYKEG MRLMLSREDL LIHVYASHES RMSAVERAEQ LESELGSEYP  120
CFVKPMVQSH AHMPKEDEMI TLEDEDGNES PSKYLADSTR LSGGWRCFTL DHELVDGDAL  180
VFQLIRPTKF KVYIIRVNEH EN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007042396.11e-74AP2/B3-like transcriptional factor family protein, putative
SwissprotQ1G3M37e-55Y3918_ARATH; B3 domain-containing protein At3g19184
TrEMBLF6HQC14e-75F6HQC1_VITVI; Putative uncharacterized protein
STRINGVIT_03s0063g00620.t011e-74(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.11e-46B3 family protein